Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm28450-201ENSMUST00000187349 638 ntBASIC12.97□□□□□ -0.33
Scn1aA2APX8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.97□□□□□ -0.33
Scn1aA2APX8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Gm9630-201ENSMUST00000178304 885 ntBASIC12.96□□□□□ -0.33
Scn1aA2APX8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.96□□□□□ -0.33
Scn1aA2APX8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.96□□□□□ -0.33
Scn1aA2APX8 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.96□□□□□ -0.33
Scn1aA2APX8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1aA2APX8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm7722-201ENSMUST00000120646 741 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm27530-201ENSMUST00000184096 98 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm29615-201ENSMUST00000185371 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm28224-201ENSMUST00000186078 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm29001-201ENSMUST00000186177 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm28292-201ENSMUST00000186593 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm28101-201ENSMUST00000187608 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm29076-201ENSMUST00000187689 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm28302-201ENSMUST00000187931 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm28646-201ENSMUST00000188220 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm28205-201ENSMUST00000189177 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm29032-201ENSMUST00000189797 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm28695-201ENSMUST00000190300 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm37448-201ENSMUST00000192795 697 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm17931-201ENSMUST00000208132 634 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.96□□□□□ -0.34
Scn1aA2APX8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn1aA2APX8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Gm4909-201ENSMUST00000118749 794 ntBASIC12.95□□□□□ -0.34
Scn1aA2APX8 Gm12164-201ENSMUST00000121695 551 ntBASIC12.95□□□□□ -0.34
Scn1aA2APX8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.95□□□□□ -0.34
Scn1aA2APX8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.95□□□□□ -0.34
Scn1aA2APX8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn1aA2APX8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms