Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Gm24231-201ENSMUST00000104315 133 ntBASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Gm11478-201ENSMUST00000117851 599 ntBASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Gm12384-201ENSMUST00000119228 919 ntBASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Gm6091-201ENSMUST00000098307 165 ntBASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc194A0A140LIT1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms