Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm4875-201ENSMUST00000118257 786 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm27702-201ENSMUST00000184512 56 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm7775-201ENSMUST00000218871 853 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm9063-201ENSMUST00000223299 582 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.44□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms