Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Gm44855-201ENSMUST00000205725 362 ntBASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Map1b-203ENSMUST00000223725 2669 ntBASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav13-4-dv7A0A075B6C2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm45684-201ENSMUST00000210244 1571 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm12291-201ENSMUST00000121627 311 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm6152-201ENSMUST00000151704 340 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm9630-201ENSMUST00000178304 885 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm28693-202ENSMUST00000190758 331 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm19184-201ENSMUST00000196798 928 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm42929-201ENSMUST00000198374 1286 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm38049-201ENSMUST00000195698 1372 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm42463-201ENSMUST00000198041 4886 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav13-4-dv7A0A075B6C2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms