Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm9908-201ENSMUST00000211534 448 ntBASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav6n-6A0A075B6B2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Btrc-209ENSMUST00000224478 2194 ntBASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav6n-6A0A075B6B2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms