Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptpn4Q9WU22 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ptpn4Q9WU22 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptpn4Q9WU22 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.47■□□□□ 0.87
Ptpn4Q9WU22 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptpn4Q9WU22 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ptpn4Q9WU22 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.47■□□□□ 0.87
Ptpn4Q9WU22 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptpn4Q9WU22 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Golph3-202ENSMUST00000226517 2359 ntBASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Cap2-205ENSMUST00000225824 1634 ntBASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Ptpn4Q9WU22 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Gm16437-201ENSMUST00000025669 507 ntBASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ptpn4Q9WU22 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptpn4Q9WU22 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptpn4Q9WU22 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptpn4Q9WU22 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptpn4Q9WU22 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptpn4Q9WU22 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ptpn4Q9WU22 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ptpn4Q9WU22 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ptpn4Q9WU22 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptpn4Q9WU22 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.43■□□□□ 0.86
Ptpn4Q9WU22 Terc-201ENSMUST00000082862 423 ntBASIC20.43■□□□□ 0.86
Ptpn4Q9WU22 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ptpn4Q9WU22 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ptpn4Q9WU22 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptpn4Q9WU22 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.42■□□□□ 0.86
Ptpn4Q9WU22 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptpn4Q9WU22 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.42■□□□□ 0.86
Ptpn4Q9WU22 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ptpn4Q9WU22 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptpn4Q9WU22 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptpn4Q9WU22 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptpn4Q9WU22 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ptpn4Q9WU22 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptpn4Q9WU22 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Ptpn4Q9WU22 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ptpn4Q9WU22 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptpn4Q9WU22 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptpn4Q9WU22 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptpn4Q9WU22 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.39■□□□□ 0.85
Ptpn4Q9WU22 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptpn4Q9WU22 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.39■□□□□ 0.85
Ptpn4Q9WU22 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptpn4Q9WU22 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ptpn4Q9WU22 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.38■□□□□ 0.85
Ptpn4Q9WU22 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptpn4Q9WU22 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ptpn4Q9WU22 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptpn4Q9WU22 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptpn4Q9WU22 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptpn4Q9WU22 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptpn4Q9WU22 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptpn4Q9WU22 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptpn4Q9WU22 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptpn4Q9WU22 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms