Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col13a1Q9R1N9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col13a1Q9R1N9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col13a1Q9R1N9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col13a1Q9R1N9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col13a1Q9R1N9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col13a1Q9R1N9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col13a1Q9R1N9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col13a1Q9R1N9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col13a1Q9R1N9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col13a1Q9R1N9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col13a1Q9R1N9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col13a1Q9R1N9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Col13a1Q9R1N9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.64■□□□□ 0.42
Col13a1Q9R1N9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col13a1Q9R1N9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.64■□□□□ 0.41
Col13a1Q9R1N9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.64■□□□□ 0.41
Col13a1Q9R1N9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col13a1Q9R1N9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms