Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3h8Q9JJ48 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3h8Q9JJ48 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.43■□□□□ 0.7
Zc3h8Q9JJ48 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.43■□□□□ 0.7
Zc3h8Q9JJ48 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.43■□□□□ 0.7
Zc3h8Q9JJ48 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Zc3h8Q9JJ48 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3h8Q9JJ48 Gm22238-201ENSMUST00000175222 88 ntBASIC19.42■□□□□ 0.7
Zc3h8Q9JJ48 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.42■□□□□ 0.7
Zc3h8Q9JJ48 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Zc3h8Q9JJ48 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Zc3h8Q9JJ48 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zc3h8Q9JJ48 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zc3h8Q9JJ48 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zc3h8Q9JJ48 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h8Q9JJ48 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h8Q9JJ48 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.4■□□□□ 0.7
Zc3h8Q9JJ48 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.4■□□□□ 0.7
Zc3h8Q9JJ48 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.4■□□□□ 0.7
Zc3h8Q9JJ48 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h8Q9JJ48 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zc3h8Q9JJ48 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Zc3h8Q9JJ48 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3h8Q9JJ48 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.39■□□□□ 0.69
Zc3h8Q9JJ48 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.39■□□□□ 0.69
Zc3h8Q9JJ48 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3h8Q9JJ48 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Zc3h8Q9JJ48 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3h8Q9JJ48 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Zc3h8Q9JJ48 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3h8Q9JJ48 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3h8Q9JJ48 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zc3h8Q9JJ48 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Zc3h8Q9JJ48 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h8Q9JJ48 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h8Q9JJ48 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h8Q9JJ48 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Zc3h8Q9JJ48 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Zc3h8Q9JJ48 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zc3h8Q9JJ48 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h8Q9JJ48 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h8Q9JJ48 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Zc3h8Q9JJ48 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h8Q9JJ48 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h8Q9JJ48 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h8Q9JJ48 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h8Q9JJ48 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h8Q9JJ48 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zc3h8Q9JJ48 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h8Q9JJ48 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h8Q9JJ48 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h8Q9JJ48 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h8Q9JJ48 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Zc3h8Q9JJ48 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
Zc3h8Q9JJ48 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h8Q9JJ48 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Zc3h8Q9JJ48 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms