Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Gm22567-201ENSMUST00000175542 342 ntBASIC16.81■□□□□ 0.28
Smco4Q9JIS3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.81■□□□□ 0.28
Smco4Q9JIS3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Gm16148-201ENSMUST00000119653 893 ntBASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.8■□□□□ 0.28
Smco4Q9JIS3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.79■□□□□ 0.28
Smco4Q9JIS3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco4Q9JIS3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco4Q9JIS3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco4Q9JIS3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco4Q9JIS3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco4Q9JIS3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smco4Q9JIS3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.78■□□□□ 0.28
Smco4Q9JIS3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smco4Q9JIS3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smco4Q9JIS3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smco4Q9JIS3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Smco4Q9JIS3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smco4Q9JIS3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smco4Q9JIS3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smco4Q9JIS3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smco4Q9JIS3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Smco4Q9JIS3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smco4Q9JIS3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smco4Q9JIS3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smco4Q9JIS3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms