Protein–RNA interactions for Protein: Q9JHW9

Aldh1a3, Aldehyde dehydrogenase family 1 member A3, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a3Q9JHW9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Aldh1a3Q9JHW9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Aldh1a3Q9JHW9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.44■■□□□ 1.02
Aldh1a3Q9JHW9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a3Q9JHW9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a3Q9JHW9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a3Q9JHW9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a3Q9JHW9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a3Q9JHW9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a3Q9JHW9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
Aldh1a3Q9JHW9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a3Q9JHW9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.42■■□□□ 1.02
Aldh1a3Q9JHW9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.42■■□□□ 1.02
Aldh1a3Q9JHW9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a3Q9JHW9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a3Q9JHW9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a3Q9JHW9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a3Q9JHW9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Aldh1a3Q9JHW9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.41■■□□□ 1.02
Aldh1a3Q9JHW9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a3Q9JHW9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.41■■□□□ 1.02
Aldh1a3Q9JHW9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.4■■□□□ 1.02
Aldh1a3Q9JHW9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Aldh1a3Q9JHW9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
Aldh1a3Q9JHW9 Gm9847-201ENSMUST00000052528 599 ntBASIC21.39■■□□□ 1.01
Aldh1a3Q9JHW9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Aldh1a3Q9JHW9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Aldh1a3Q9JHW9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Aldh1a3Q9JHW9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Aldh1a3Q9JHW9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Aldh1a3Q9JHW9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Aldh1a3Q9JHW9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Aldh1a3Q9JHW9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Aldh1a3Q9JHW9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Aldh1a3Q9JHW9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Gm13241-201ENSMUST00000094493 780 ntBASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Aldh1a3Q9JHW9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Aldh1a3Q9JHW9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.36■■□□□ 1.01
Aldh1a3Q9JHW9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Aldh1a3Q9JHW9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Aldh1a3Q9JHW9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Aldh1a3Q9JHW9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Aldh1a3Q9JHW9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Aldh1a3Q9JHW9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Aldh1a3Q9JHW9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Aldh1a3Q9JHW9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.33■■□□□ 1.01
Aldh1a3Q9JHW9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Aldh1a3Q9JHW9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Aldh1a3Q9JHW9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Gm15039-201ENSMUST00000118914 875 ntBASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Aldh1a3Q9JHW9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Aldh1a3Q9JHW9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Aldh1a3Q9JHW9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.31■■□□□ 1
Aldh1a3Q9JHW9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Aldh1a3Q9JHW9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Aldh1a3Q9JHW9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms