Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ube4bQ9ES00 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.93■□□□□ 0.78
Ube4bQ9ES00 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4bQ9ES00 Gm4799-201ENSMUST00000095396 657 ntBASIC19.92■□□□□ 0.78
Ube4bQ9ES00 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ube4bQ9ES00 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4bQ9ES00 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ube4bQ9ES00 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4bQ9ES00 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4bQ9ES00 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4bQ9ES00 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4bQ9ES00 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.91■□□□□ 0.78
Ube4bQ9ES00 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.91■□□□□ 0.78
Ube4bQ9ES00 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ube4bQ9ES00 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Gm11599-201ENSMUST00000118720 878 ntBASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ube4bQ9ES00 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ube4bQ9ES00 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ube4bQ9ES00 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.87■□□□□ 0.77
Ube4bQ9ES00 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ube4bQ9ES00 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube4bQ9ES00 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube4bQ9ES00 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube4bQ9ES00 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ube4bQ9ES00 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ube4bQ9ES00 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4bQ9ES00 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.84■□□□□ 0.77
Ube4bQ9ES00 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4bQ9ES00 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4bQ9ES00 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ube4bQ9ES00 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ube4bQ9ES00 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ube4bQ9ES00 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube4bQ9ES00 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube4bQ9ES00 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.83■□□□□ 0.76
Ube4bQ9ES00 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.82■□□□□ 0.76
Ube4bQ9ES00 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms