Protein–RNA interactions for Protein: Q9ERE8

Tlnrd1, Talin rod domain-containing protein 1, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlnrd1Q9ERE8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlnrd1Q9ERE8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Gm12366-201ENSMUST00000121722 873 ntBASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Gm5786-201ENSMUST00000085368 882 ntBASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tlnrd1Q9ERE8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tlnrd1Q9ERE8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tlnrd1Q9ERE8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlnrd1Q9ERE8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlnrd1Q9ERE8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlnrd1Q9ERE8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlnrd1Q9ERE8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tlnrd1Q9ERE8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlnrd1Q9ERE8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tlnrd1Q9ERE8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlnrd1Q9ERE8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.46■□□□□ 0.39
Tlnrd1Q9ERE8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlnrd1Q9ERE8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tlnrd1Q9ERE8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 Gm22567-201ENSMUST00000175542 342 ntBASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms