Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps35Q9EQH3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.87■□□□□ 0.93
Vps35Q9EQH3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps35Q9EQH3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps35Q9EQH3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.86■□□□□ 0.93
Vps35Q9EQH3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps35Q9EQH3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps35Q9EQH3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps35Q9EQH3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Vps35Q9EQH3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Vps35Q9EQH3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps35Q9EQH3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps35Q9EQH3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps35Q9EQH3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Vps35Q9EQH3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Vps35Q9EQH3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps35Q9EQH3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps35Q9EQH3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps35Q9EQH3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps35Q9EQH3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps35Q9EQH3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps35Q9EQH3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Vps35Q9EQH3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps35Q9EQH3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps35Q9EQH3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.81■□□□□ 0.92
Vps35Q9EQH3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Vps35Q9EQH3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.81■□□□□ 0.92
Vps35Q9EQH3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps35Q9EQH3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps35Q9EQH3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Vps35Q9EQH3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps35Q9EQH3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps35Q9EQH3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.79■□□□□ 0.92
Vps35Q9EQH3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.79■□□□□ 0.92
Vps35Q9EQH3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps35Q9EQH3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.79■□□□□ 0.92
Vps35Q9EQH3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps35Q9EQH3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps35Q9EQH3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps35Q9EQH3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Gm10399-202ENSMUST00000202768 748 ntBASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps35Q9EQH3 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.76■□□□□ 0.91
Vps35Q9EQH3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps35Q9EQH3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.76■□□□□ 0.91
Vps35Q9EQH3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps35Q9EQH3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vps35Q9EQH3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms