Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nif3l1Q9EQ80 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.8■□□□□ 0.92
Nif3l1Q9EQ80 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nif3l1Q9EQ80 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nif3l1Q9EQ80 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nif3l1Q9EQ80 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nif3l1Q9EQ80 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nif3l1Q9EQ80 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.79■□□□□ 0.92
Nif3l1Q9EQ80 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Nif3l1Q9EQ80 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.79■□□□□ 0.92
Nif3l1Q9EQ80 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nif3l1Q9EQ80 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Gm15820-201ENSMUST00000201566 728 ntBASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nif3l1Q9EQ80 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nif3l1Q9EQ80 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.76■□□□□ 0.91
Nif3l1Q9EQ80 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Nif3l1Q9EQ80 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nif3l1Q9EQ80 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nif3l1Q9EQ80 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nif3l1Q9EQ80 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 Gm15546-201ENSMUST00000122095 826 ntBASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nif3l1Q9EQ80 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Gm10399-202ENSMUST00000202768 748 ntBASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nif3l1Q9EQ80 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nif3l1Q9EQ80 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nif3l1Q9EQ80 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nif3l1Q9EQ80 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nif3l1Q9EQ80 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nif3l1Q9EQ80 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nif3l1Q9EQ80 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nif3l1Q9EQ80 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nif3l1Q9EQ80 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.7■□□□□ 0.9
Nif3l1Q9EQ80 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nif3l1Q9EQ80 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nif3l1Q9EQ80 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.7■□□□□ 0.9
Nif3l1Q9EQ80 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nif3l1Q9EQ80 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nif3l1Q9EQ80 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nif3l1Q9EQ80 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nif3l1Q9EQ80 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nif3l1Q9EQ80 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nif3l1Q9EQ80 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nif3l1Q9EQ80 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Nif3l1Q9EQ80 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nif3l1Q9EQ80 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nif3l1Q9EQ80 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.68■□□□□ 0.9
Nif3l1Q9EQ80 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.68■□□□□ 0.9
Nif3l1Q9EQ80 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nif3l1Q9EQ80 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
Nif3l1Q9EQ80 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.67■□□□□ 0.9
Nif3l1Q9EQ80 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms