Protein–RNA interactions for Protein: Q9DCC3

Ccdc107, Coiled-coil domain-containing protein 107, mousemouse

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc107Q9DCC3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc107Q9DCC3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc107Q9DCC3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc107Q9DCC3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.35■□□□□ 0.53
Ccdc107Q9DCC3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc107Q9DCC3 Nkain2-201ENSMUST00000092602 558 ntBASIC18.35■□□□□ 0.53
Ccdc107Q9DCC3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc107Q9DCC3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc107Q9DCC3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc107Q9DCC3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc107Q9DCC3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.33■□□□□ 0.53
Ccdc107Q9DCC3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc107Q9DCC3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ccdc107Q9DCC3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc107Q9DCC3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc107Q9DCC3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Gm45855-201ENSMUST00000212546 880 ntBASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc107Q9DCC3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.3■□□□□ 0.52
Ccdc107Q9DCC3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc107Q9DCC3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc107Q9DCC3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc107Q9DCC3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc107Q9DCC3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc107Q9DCC3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc107Q9DCC3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc107Q9DCC3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc107Q9DCC3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc107Q9DCC3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc107Q9DCC3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ccdc107Q9DCC3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc107Q9DCC3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc107Q9DCC3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc107Q9DCC3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc107Q9DCC3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms