Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm6139-201ENSMUST00000079261 882 ntBASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp8Q9DB85 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.54■□□□□ 0.88
Rrp8Q9DB85 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp8Q9DB85 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rrp8Q9DB85 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rrp8Q9DB85 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp8Q9DB85 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp8Q9DB85 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.52■□□□□ 0.88
Rrp8Q9DB85 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rrp8Q9DB85 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rrp8Q9DB85 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rrp8Q9DB85 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rrp8Q9DB85 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.52■□□□□ 0.87
Rrp8Q9DB85 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rrp8Q9DB85 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Gm18284-201ENSMUST00000172604 624 ntBASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rrp8Q9DB85 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Mir7075-201ENSMUST00000184187 82 ntBASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rrp8Q9DB85 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rrp8Q9DB85 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rrp8Q9DB85 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rrp8Q9DB85 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rrp8Q9DB85 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Rrp8Q9DB85 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rrp8Q9DB85 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rrp8Q9DB85 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.48■□□□□ 0.87
Rrp8Q9DB85 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rrp8Q9DB85 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rrp8Q9DB85 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rrp8Q9DB85 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rrp8Q9DB85 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rrp8Q9DB85 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Rrp8Q9DB85 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rrp8Q9DB85 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rrp8Q9DB85 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rrp8Q9DB85 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Rrp8Q9DB85 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Gm43017-201ENSMUST00000198296 752 ntBASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rrp8Q9DB85 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rrp8Q9DB85 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.44■□□□□ 0.86
Rrp8Q9DB85 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rrp8Q9DB85 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms