Protein–RNA interactions for Protein: Q9D8T0

Fam3a, Protein FAM3A, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam3aQ9D8T0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam3aQ9D8T0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fam3aQ9D8T0 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.66■■□□□ 1.06
Fam3aQ9D8T0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Fam3aQ9D8T0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Fam3aQ9D8T0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fam3aQ9D8T0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Fam3aQ9D8T0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.65■■□□□ 1.06
Fam3aQ9D8T0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fam3aQ9D8T0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fam3aQ9D8T0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Fam3aQ9D8T0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fam3aQ9D8T0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Fam3aQ9D8T0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
Fam3aQ9D8T0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Fam3aQ9D8T0 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.64■■□□□ 1.05
Fam3aQ9D8T0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Fam3aQ9D8T0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Fam3aQ9D8T0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fam3aQ9D8T0 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam3aQ9D8T0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fam3aQ9D8T0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.61■■□□□ 1.05
Fam3aQ9D8T0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fam3aQ9D8T0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Fam3aQ9D8T0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam3aQ9D8T0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Fam3aQ9D8T0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fam3aQ9D8T0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.59■■□□□ 1.05
Fam3aQ9D8T0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fam3aQ9D8T0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fam3aQ9D8T0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Fam3aQ9D8T0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fam3aQ9D8T0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 Gm15820-201ENSMUST00000201566 728 ntBASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 Gm10399-202ENSMUST00000202768 748 ntBASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Fam3aQ9D8T0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Fam3aQ9D8T0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Gm15546-201ENSMUST00000122095 826 ntBASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam3aQ9D8T0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fam3aQ9D8T0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fam3aQ9D8T0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fam3aQ9D8T0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fam3aQ9D8T0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.55■■□□□ 1.04
Fam3aQ9D8T0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Fam3aQ9D8T0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam3aQ9D8T0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Fam3aQ9D8T0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam3aQ9D8T0 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.53■■□□□ 1.04
Fam3aQ9D8T0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam3aQ9D8T0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Fam3aQ9D8T0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam3aQ9D8T0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.52■■□□□ 1.04
Fam3aQ9D8T0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam3aQ9D8T0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Fam3aQ9D8T0 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.52■■□□□ 1.04
Fam3aQ9D8T0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam3aQ9D8T0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms