Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd2Q9D7V2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd2Q9D7V2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd2Q9D7V2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd2Q9D7V2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd2Q9D7V2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd2Q9D7V2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.27■□□□□ 0.36
Lysmd2Q9D7V2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lysmd2Q9D7V2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.27■□□□□ 0.36
Lysmd2Q9D7V2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd2Q9D7V2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd2Q9D7V2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Lysmd2Q9D7V2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Lysmd2Q9D7V2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lysmd2Q9D7V2 Golph3-202ENSMUST00000226517 2359 ntBASIC17.26■□□□□ 0.35
Lysmd2Q9D7V2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd2Q9D7V2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lysmd2Q9D7V2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lysmd2Q9D7V2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lysmd2Q9D7V2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lysmd2Q9D7V2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd2Q9D7V2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd2Q9D7V2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd2Q9D7V2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lysmd2Q9D7V2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd2Q9D7V2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd2Q9D7V2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd2Q9D7V2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.21■□□□□ 0.34
Lysmd2Q9D7V2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Lysmd2Q9D7V2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Lysmd2Q9D7V2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd2Q9D7V2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd2Q9D7V2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lysmd2Q9D7V2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.19■□□□□ 0.34
Lysmd2Q9D7V2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lysmd2Q9D7V2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Lysmd2Q9D7V2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd2Q9D7V2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd2Q9D7V2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd2Q9D7V2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd2Q9D7V2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Lysmd2Q9D7V2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd2Q9D7V2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd2Q9D7V2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd2Q9D7V2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd2Q9D7V2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd2Q9D7V2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms