Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.9■□□□□ 0.78
Upk1aQ9D132 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.9■□□□□ 0.78
Upk1aQ9D132 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1aQ9D132 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1aQ9D132 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1aQ9D132 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1aQ9D132 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Upk1aQ9D132 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1aQ9D132 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1aQ9D132 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1aQ9D132 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1aQ9D132 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1aQ9D132 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1aQ9D132 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Upk1aQ9D132 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1aQ9D132 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1aQ9D132 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1aQ9D132 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.87■□□□□ 0.77
Upk1aQ9D132 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1aQ9D132 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1aQ9D132 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1aQ9D132 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1aQ9D132 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
Upk1aQ9D132 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1aQ9D132 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.86■□□□□ 0.77
Upk1aQ9D132 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1aQ9D132 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1aQ9D132 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.86■□□□□ 0.77
Upk1aQ9D132 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Upk1aQ9D132 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Upk1aQ9D132 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1aQ9D132 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1aQ9D132 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk1aQ9D132 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.83■□□□□ 0.76
Upk1aQ9D132 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk1aQ9D132 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.83■□□□□ 0.76
Upk1aQ9D132 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.82■□□□□ 0.76
Upk1aQ9D132 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Upk1aQ9D132 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1aQ9D132 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1aQ9D132 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1aQ9D132 Gm11687-201ENSMUST00000118911 886 ntBASIC19.81■□□□□ 0.76
Upk1aQ9D132 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.81■□□□□ 0.76
Upk1aQ9D132 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1aQ9D132 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1aQ9D132 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1aQ9D132 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Upk1aQ9D132 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1aQ9D132 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Upk1aQ9D132 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Upk1aQ9D132 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1aQ9D132 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1aQ9D132 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms