Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lysmd1Q9D0E3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.16■■□□□ 1.3
Lysmd1Q9D0E3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Lysmd1Q9D0E3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Lysmd1Q9D0E3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lysmd1Q9D0E3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lysmd1Q9D0E3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
Lysmd1Q9D0E3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 Gm8520-201ENSMUST00000186517 868 ntBASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lysmd1Q9D0E3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Lysmd1Q9D0E3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.14■■□□□ 1.29
Lysmd1Q9D0E3 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.14■■□□□ 1.29
Lysmd1Q9D0E3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.14■■□□□ 1.29
Lysmd1Q9D0E3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Lysmd1Q9D0E3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lysmd1Q9D0E3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Lysmd1Q9D0E3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lysmd1Q9D0E3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lysmd1Q9D0E3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lysmd1Q9D0E3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Lysmd1Q9D0E3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lysmd1Q9D0E3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.12■■□□□ 1.29
Lysmd1Q9D0E3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.12■■□□□ 1.29
Lysmd1Q9D0E3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lysmd1Q9D0E3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lysmd1Q9D0E3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Lysmd1Q9D0E3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.11■■□□□ 1.29
Lysmd1Q9D0E3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lysmd1Q9D0E3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Lysmd1Q9D0E3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Lysmd1Q9D0E3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Lysmd1Q9D0E3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lysmd1Q9D0E3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.1■■□□□ 1.29
Lysmd1Q9D0E3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Lysmd1Q9D0E3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Lysmd1Q9D0E3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Lysmd1Q9D0E3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lysmd1Q9D0E3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.08■■□□□ 1.28
Lysmd1Q9D0E3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lysmd1Q9D0E3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Lysmd1Q9D0E3 Mir6982-201ENSMUST00000184354 68 ntBASIC23.07■■□□□ 1.28
Lysmd1Q9D0E3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Lysmd1Q9D0E3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.07■■□□□ 1.28
Lysmd1Q9D0E3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lysmd1Q9D0E3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lysmd1Q9D0E3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.06■■□□□ 1.28
Lysmd1Q9D0E3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lysmd1Q9D0E3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.05■■□□□ 1.28
Lysmd1Q9D0E3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lysmd1Q9D0E3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lysmd1Q9D0E3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lysmd1Q9D0E3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Lysmd1Q9D0E3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Lysmd1Q9D0E3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
Lysmd1Q9D0E3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lysmd1Q9D0E3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Lysmd1Q9D0E3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lysmd1Q9D0E3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Lysmd1Q9D0E3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lysmd1Q9D0E3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lysmd1Q9D0E3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lysmd1Q9D0E3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lysmd1Q9D0E3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms