Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim13Q9CYB0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim13Q9CYB0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim13Q9CYB0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim13Q9CYB0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim13Q9CYB0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim13Q9CYB0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim13Q9CYB0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim13Q9CYB0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim13Q9CYB0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim13Q9CYB0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim13Q9CYB0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim13Q9CYB0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim13Q9CYB0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim13Q9CYB0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim13Q9CYB0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim13Q9CYB0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim13Q9CYB0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim13Q9CYB0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim13Q9CYB0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim13Q9CYB0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim13Q9CYB0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim13Q9CYB0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim13Q9CYB0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Trim13Q9CYB0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim13Q9CYB0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.11■□□□□ 0.65
Trim13Q9CYB0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim13Q9CYB0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim13Q9CYB0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim13Q9CYB0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim13Q9CYB0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim13Q9CYB0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim13Q9CYB0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim13Q9CYB0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim13Q9CYB0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim13Q9CYB0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Trim13Q9CYB0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim13Q9CYB0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim13Q9CYB0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Trim13Q9CYB0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Trim13Q9CYB0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 276.3 ms