Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.71■■□□□ 1.07
Rnf135Q9CWS1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rnf135Q9CWS1 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Rnf135Q9CWS1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf135Q9CWS1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf135Q9CWS1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.69■■□□□ 1.06
Rnf135Q9CWS1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Rnf135Q9CWS1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf135Q9CWS1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf135Q9CWS1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf135Q9CWS1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf135Q9CWS1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf135Q9CWS1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rnf135Q9CWS1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.67■■□□□ 1.06
Rnf135Q9CWS1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf135Q9CWS1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf135Q9CWS1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf135Q9CWS1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.66■■□□□ 1.06
Rnf135Q9CWS1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.66■■□□□ 1.06
Rnf135Q9CWS1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rnf135Q9CWS1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf135Q9CWS1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf135Q9CWS1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf135Q9CWS1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf135Q9CWS1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf135Q9CWS1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf135Q9CWS1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf135Q9CWS1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf135Q9CWS1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf135Q9CWS1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf135Q9CWS1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf135Q9CWS1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf135Q9CWS1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf135Q9CWS1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf135Q9CWS1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf135Q9CWS1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Gm15820-201ENSMUST00000201566 728 ntBASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rnf135Q9CWS1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf135Q9CWS1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Rnf135Q9CWS1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Gm43566-201ENSMUST00000196851 808 ntBASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf135Q9CWS1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms