Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Retreg3Q9CQV4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg3Q9CQV4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retreg3Q9CQV4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retreg3Q9CQV4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Retreg3Q9CQV4 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.08■□□□□ 0.96
Retreg3Q9CQV4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retreg3Q9CQV4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.07■□□□□ 0.96
Retreg3Q9CQV4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg3Q9CQV4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.07■□□□□ 0.96
Retreg3Q9CQV4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.07■□□□□ 0.96
Retreg3Q9CQV4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg3Q9CQV4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retreg3Q9CQV4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg3Q9CQV4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg3Q9CQV4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg3Q9CQV4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg3Q9CQV4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg3Q9CQV4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg3Q9CQV4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retreg3Q9CQV4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retreg3Q9CQV4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retreg3Q9CQV4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Retreg3Q9CQV4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retreg3Q9CQV4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retreg3Q9CQV4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retreg3Q9CQV4 Gm9959-201ENSMUST00000068277 390 ntBASIC21.04■□□□□ 0.96
Retreg3Q9CQV4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retreg3Q9CQV4 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.03■□□□□ 0.96
Retreg3Q9CQV4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retreg3Q9CQV4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retreg3Q9CQV4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retreg3Q9CQV4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retreg3Q9CQV4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retreg3Q9CQV4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21■□□□□ 0.95
Retreg3Q9CQV4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21■□□□□ 0.95
Retreg3Q9CQV4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retreg3Q9CQV4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21■□□□□ 0.95
Retreg3Q9CQV4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retreg3Q9CQV4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg3Q9CQV4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg3Q9CQV4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg3Q9CQV4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Retreg3Q9CQV4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg3Q9CQV4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg3Q9CQV4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg3Q9CQV4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg3Q9CQV4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.98■□□□□ 0.95
Retreg3Q9CQV4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.98■□□□□ 0.95
Retreg3Q9CQV4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg3Q9CQV4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retreg3Q9CQV4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.97■□□□□ 0.95
Retreg3Q9CQV4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retreg3Q9CQV4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retreg3Q9CQV4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg3Q9CQV4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg3Q9CQV4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg3Q9CQV4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg3Q9CQV4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg3Q9CQV4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg3Q9CQV4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg3Q9CQV4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms