Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Nkx6-1Q99MA9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.71■□□□□ 0.75
Nkx6-1Q99MA9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-1Q99MA9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nkx6-1Q99MA9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-1Q99MA9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkx6-1Q99MA9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-1Q99MA9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-1Q99MA9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-1Q99MA9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx6-1Q99MA9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Gm7291-201ENSMUST00000199147 382 ntBASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nkx6-1Q99MA9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx6-1Q99MA9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.66■□□□□ 0.74
Nkx6-1Q99MA9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx6-1Q99MA9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx6-1Q99MA9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx6-1Q99MA9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx6-1Q99MA9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx6-1Q99MA9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.64■□□□□ 0.74
Nkx6-1Q99MA9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Nkx6-1Q99MA9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx6-1Q99MA9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.64■□□□□ 0.73
Nkx6-1Q99MA9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nkx6-1Q99MA9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx6-1Q99MA9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.64■□□□□ 0.73
Nkx6-1Q99MA9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx6-1Q99MA9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx6-1Q99MA9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx6-1Q99MA9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx6-1Q99MA9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx6-1Q99MA9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkx6-1Q99MA9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx6-1Q99MA9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-1Q99MA9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-1Q99MA9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-1Q99MA9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nkx6-1Q99MA9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nkx6-1Q99MA9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx6-1Q99MA9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx6-1Q99MA9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx6-1Q99MA9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.59■□□□□ 0.73
Nkx6-1Q99MA9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.59■□□□□ 0.73
Nkx6-1Q99MA9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx6-1Q99MA9 Gm42569-201ENSMUST00000200539 472 ntBASIC19.59■□□□□ 0.73
Nkx6-1Q99MA9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx6-1Q99MA9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nkx6-1Q99MA9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms