Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.32■■□□□ 1
Smarcd2Q99JR8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.32■■□□□ 1
Smarcd2Q99JR8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Smarcd2Q99JR8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcd2Q99JR8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcd2Q99JR8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Smarcd2Q99JR8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.32■■□□□ 1
Smarcd2Q99JR8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.32■■□□□ 1
Smarcd2Q99JR8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Smarcd2Q99JR8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcd2Q99JR8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Smarcd2Q99JR8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcd2Q99JR8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcd2Q99JR8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.3■■□□□ 1
Smarcd2Q99JR8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Smarcd2Q99JR8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcd2Q99JR8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.29■■□□□ 1
Smarcd2Q99JR8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Smarcd2Q99JR8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcd2Q99JR8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Smarcd2Q99JR8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.29■■□□□ 1
Smarcd2Q99JR8 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.29■■□□□ 1
Smarcd2Q99JR8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.29■■□□□ 1
Smarcd2Q99JR8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.29■■□□□ 1
Smarcd2Q99JR8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcd2Q99JR8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Smarcd2Q99JR8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Mir7075-201ENSMUST00000184187 82 ntBASIC21.28■■□□□ 1
Smarcd2Q99JR8 Gm8495-201ENSMUST00000188740 694 ntBASIC21.28■■□□□ 1
Smarcd2Q99JR8 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.28■■□□□ 1
Smarcd2Q99JR8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcd2Q99JR8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcd2Q99JR8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarcd2Q99JR8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcd2Q99JR8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcd2Q99JR8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.27■□□□□ 0.99
Smarcd2Q99JR8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Smarcd2Q99JR8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.26■□□□□ 0.99
Smarcd2Q99JR8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd2Q99JR8 Gm7143-201ENSMUST00000222811 859 ntBASIC21.26■□□□□ 0.99
Smarcd2Q99JR8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd2Q99JR8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd2Q99JR8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Gm18284-201ENSMUST00000172604 624 ntBASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd2Q99JR8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd2Q99JR8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd2Q99JR8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcd2Q99JR8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms