Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prdm9Q96EQ9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm9Q96EQ9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm9Q96EQ9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Prdm9Q96EQ9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prdm9Q96EQ9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prdm9Q96EQ9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Prdm9Q96EQ9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm9Q96EQ9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.62■□□□□ 0.89
Prdm9Q96EQ9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm9Q96EQ9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.62■□□□□ 0.89
Prdm9Q96EQ9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm9Q96EQ9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Prdm9Q96EQ9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm9Q96EQ9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm9Q96EQ9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Prdm9Q96EQ9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm9Q96EQ9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm9Q96EQ9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm9Q96EQ9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm9Q96EQ9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Prdm9Q96EQ9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm9Q96EQ9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm9Q96EQ9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.58■□□□□ 0.89
Prdm9Q96EQ9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm9Q96EQ9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm9Q96EQ9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm9Q96EQ9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.56■□□□□ 0.88
Prdm9Q96EQ9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Prdm9Q96EQ9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm9Q96EQ9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm9Q96EQ9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms