Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Smc1bQ920F6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Smc1bQ920F6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Smc1bQ920F6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Smc1bQ920F6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc1bQ920F6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc1bQ920F6 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.98■■□□□ 1.43
Smc1bQ920F6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc1bQ920F6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Smc1bQ920F6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.98■■□□□ 1.43
Smc1bQ920F6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Smc1bQ920F6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Smc1bQ920F6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc1bQ920F6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smc1bQ920F6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.97■■□□□ 1.43
Smc1bQ920F6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Smc1bQ920F6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Smc1bQ920F6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.97■■□□□ 1.43
Smc1bQ920F6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smc1bQ920F6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smc1bQ920F6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smc1bQ920F6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smc1bQ920F6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc1bQ920F6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.96■■□□□ 1.43
Smc1bQ920F6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.96■■□□□ 1.43
Smc1bQ920F6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc1bQ920F6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Smc1bQ920F6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smc1bQ920F6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc1bQ920F6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc1bQ920F6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.95■■□□□ 1.42
Smc1bQ920F6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc1bQ920F6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.95■■□□□ 1.42
Smc1bQ920F6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc1bQ920F6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc1bQ920F6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Gm18284-201ENSMUST00000172604 624 ntBASIC23.94■■□□□ 1.42
Smc1bQ920F6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc1bQ920F6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.93■■□□□ 1.42
Smc1bQ920F6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc1bQ920F6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.93■■□□□ 1.42
Smc1bQ920F6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smc1bQ920F6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.93■■□□□ 1.42
Smc1bQ920F6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc1bQ920F6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Smc1bQ920F6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Smc1bQ920F6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc1bQ920F6 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.92■■□□□ 1.42
Smc1bQ920F6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Smc1bQ920F6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Smc1bQ920F6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc1bQ920F6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Smc1bQ920F6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc1bQ920F6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc1bQ920F6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Smc1bQ920F6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Smc1bQ920F6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Smc1bQ920F6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc1bQ920F6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc1bQ920F6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smc1bQ920F6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.9■■□□□ 1.42
Smc1bQ920F6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc1bQ920F6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.89■■□□□ 1.42
Smc1bQ920F6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smc1bQ920F6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smc1bQ920F6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc1bQ920F6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.89■■□□□ 1.41
Smc1bQ920F6 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.89■■□□□ 1.41
Smc1bQ920F6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc1bQ920F6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Smc1bQ920F6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc1bQ920F6 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.87■■□□□ 1.41
Smc1bQ920F6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc1bQ920F6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc1bQ920F6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc1bQ920F6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms