Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhb5Q91XZ5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb5Q91XZ5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Pcdhb5Q91XZ5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb5Q91XZ5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb5Q91XZ5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb5Q91XZ5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb5Q91XZ5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.84■■□□□ 1.57
Pcdhb5Q91XZ5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Pcdhb5Q91XZ5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhb5Q91XZ5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.84■■□□□ 1.57
Pcdhb5Q91XZ5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.84■■□□□ 1.57
Pcdhb5Q91XZ5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhb5Q91XZ5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhb5Q91XZ5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb5Q91XZ5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb5Q91XZ5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb5Q91XZ5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Pcdhb5Q91XZ5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
Pcdhb5Q91XZ5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb5Q91XZ5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb5Q91XZ5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Pcdhb5Q91XZ5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Pcdhb5Q91XZ5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
Pcdhb5Q91XZ5 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb5Q91XZ5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.81■■□□□ 1.56
Pcdhb5Q91XZ5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb5Q91XZ5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.8■■□□□ 1.56
Pcdhb5Q91XZ5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Pcdhb5Q91XZ5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.8■■□□□ 1.56
Pcdhb5Q91XZ5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Pcdhb5Q91XZ5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb5Q91XZ5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb5Q91XZ5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.79■■□□□ 1.56
Pcdhb5Q91XZ5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb5Q91XZ5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Pcdhb5Q91XZ5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb5Q91XZ5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.79■■□□□ 1.56
Pcdhb5Q91XZ5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb5Q91XZ5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb5Q91XZ5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb5Q91XZ5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb5Q91XZ5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Pcdhb5Q91XZ5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdhb5Q91XZ5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb5Q91XZ5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.74■■□□□ 1.55
Pcdhb5Q91XZ5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb5Q91XZ5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb5Q91XZ5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.73■■□□□ 1.55
Pcdhb5Q91XZ5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.73■■□□□ 1.55
Pcdhb5Q91XZ5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhb5Q91XZ5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhb5Q91XZ5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb5Q91XZ5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Pcdhb5Q91XZ5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.72■■□□□ 1.55
Pcdhb5Q91XZ5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb5Q91XZ5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Gm43137-201ENSMUST00000198052 594 ntBASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Gm7143-201ENSMUST00000222811 859 ntBASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb5Q91XZ5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhb5Q91XZ5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms