Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhga4Q91XY4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga4Q91XY4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga4Q91XY4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga4Q91XY4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdhga4Q91XY4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga4Q91XY4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga4Q91XY4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga4Q91XY4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga4Q91XY4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga4Q91XY4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga4Q91XY4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga4Q91XY4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga4Q91XY4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhga4Q91XY4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhga4Q91XY4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga4Q91XY4 Gm10399-202ENSMUST00000202768 748 ntBASIC20.39■□□□□ 0.85
Pcdhga4Q91XY4 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.39■□□□□ 0.85
Pcdhga4Q91XY4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhga4Q91XY4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga4Q91XY4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga4Q91XY4 Etf1-202ENSMUST00000180351 108 ntBASIC20.38■□□□□ 0.85
Pcdhga4Q91XY4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhga4Q91XY4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdhga4Q91XY4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga4Q91XY4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Gm9959-201ENSMUST00000068277 390 ntBASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga4Q91XY4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga4Q91XY4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga4Q91XY4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga4Q91XY4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhga4Q91XY4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga4Q91XY4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhga4Q91XY4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga4Q91XY4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 Gm7417-201ENSMUST00000192950 473 ntBASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga4Q91XY4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga4Q91XY4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdhga4Q91XY4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga4Q91XY4 Gm14117-201ENSMUST00000122417 843 ntBASIC20.33■□□□□ 0.85
Pcdhga4Q91XY4 Gm40881-201ENSMUST00000223397 166 ntBASIC20.33■□□□□ 0.85
Pcdhga4Q91XY4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga4Q91XY4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga4Q91XY4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga4Q91XY4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga4Q91XY4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga4Q91XY4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdhga4Q91XY4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms