Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sft2d2Q8VD57 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sft2d2Q8VD57 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sft2d2Q8VD57 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sft2d2Q8VD57 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sft2d2Q8VD57 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sft2d2Q8VD57 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sft2d2Q8VD57 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sft2d2Q8VD57 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sft2d2Q8VD57 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Nkain2-201ENSMUST00000092602 558 ntBASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sft2d2Q8VD57 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.77■□□□□ 0.28
Sft2d2Q8VD57 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sft2d2Q8VD57 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sft2d2Q8VD57 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Sft2d2Q8VD57 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sft2d2Q8VD57 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.77■□□□□ 0.27
Sft2d2Q8VD57 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.77■□□□□ 0.27
Sft2d2Q8VD57 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sft2d2Q8VD57 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sft2d2Q8VD57 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.74■□□□□ 0.27
Sft2d2Q8VD57 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Sft2d2Q8VD57 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.74■□□□□ 0.27
Sft2d2Q8VD57 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sft2d2Q8VD57 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms