Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgms1Q8VCQ6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgms1Q8VCQ6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.69■■□□□ 1.22
Sgms1Q8VCQ6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Sgms1Q8VCQ6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sgms1Q8VCQ6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Sgms1Q8VCQ6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgms1Q8VCQ6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Sgms1Q8VCQ6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sgms1Q8VCQ6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sgms1Q8VCQ6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sgms1Q8VCQ6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sgms1Q8VCQ6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Sgms1Q8VCQ6 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Gm13238-201ENSMUST00000117655 780 ntBASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Gm43566-201ENSMUST00000196851 808 ntBASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgms1Q8VCQ6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.66■■□□□ 1.22
Sgms1Q8VCQ6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgms1Q8VCQ6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sgms1Q8VCQ6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sgms1Q8VCQ6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
Sgms1Q8VCQ6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Sgms1Q8VCQ6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sgms1Q8VCQ6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sgms1Q8VCQ6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgms1Q8VCQ6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.62■■□□□ 1.21
Sgms1Q8VCQ6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sgms1Q8VCQ6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sgms1Q8VCQ6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sgms1Q8VCQ6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sgms1Q8VCQ6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Sgms1Q8VCQ6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sgms1Q8VCQ6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.6■■□□□ 1.21
Sgms1Q8VCQ6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sgms1Q8VCQ6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sgms1Q8VCQ6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sgms1Q8VCQ6 Gm15546-201ENSMUST00000122095 826 ntBASIC22.59■■□□□ 1.21
Sgms1Q8VCQ6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.59■■□□□ 1.21
Sgms1Q8VCQ6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Sgms1Q8VCQ6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sgms1Q8VCQ6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sgms1Q8VCQ6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sgms1Q8VCQ6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sgms1Q8VCQ6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sgms1Q8VCQ6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.58■■□□□ 1.2
Sgms1Q8VCQ6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Sgms1Q8VCQ6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sgms1Q8VCQ6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms