Protein–RNA interactions for Protein: Q8VCM8

Ncln, Nicalin, mousemouse

Known RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclnQ8VCM8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclnQ8VCM8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NclnQ8VCM8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.25■□□□□ 0.83
NclnQ8VCM8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NclnQ8VCM8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclnQ8VCM8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclnQ8VCM8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclnQ8VCM8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.24■□□□□ 0.83
NclnQ8VCM8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclnQ8VCM8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclnQ8VCM8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.24■□□□□ 0.83
NclnQ8VCM8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NclnQ8VCM8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclnQ8VCM8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclnQ8VCM8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NclnQ8VCM8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.23■□□□□ 0.83
NclnQ8VCM8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NclnQ8VCM8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclnQ8VCM8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.22■□□□□ 0.83
NclnQ8VCM8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclnQ8VCM8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Etf1-202ENSMUST00000180351 108 ntBASIC20.21■□□□□ 0.83
NclnQ8VCM8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclnQ8VCM8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclnQ8VCM8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclnQ8VCM8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NclnQ8VCM8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.2■□□□□ 0.82
NclnQ8VCM8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.2■□□□□ 0.82
NclnQ8VCM8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NclnQ8VCM8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclnQ8VCM8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NclnQ8VCM8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclnQ8VCM8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclnQ8VCM8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NclnQ8VCM8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclnQ8VCM8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclnQ8VCM8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.18■□□□□ 0.82
NclnQ8VCM8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.18■□□□□ 0.82
NclnQ8VCM8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NclnQ8VCM8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.18■□□□□ 0.82
NclnQ8VCM8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.17■□□□□ 0.82
NclnQ8VCM8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NclnQ8VCM8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.16■□□□□ 0.82
NclnQ8VCM8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NclnQ8VCM8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NclnQ8VCM8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NclnQ8VCM8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.16■□□□□ 0.82
NclnQ8VCM8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.16■□□□□ 0.82
NclnQ8VCM8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NclnQ8VCM8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.16■□□□□ 0.82
NclnQ8VCM8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NclnQ8VCM8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NclnQ8VCM8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NclnQ8VCM8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NclnQ8VCM8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NclnQ8VCM8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NclnQ8VCM8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NclnQ8VCM8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.13■□□□□ 0.81
NclnQ8VCM8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 274.5 ms