Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf8Q8VC56 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rnf8Q8VC56 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rnf8Q8VC56 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf8Q8VC56 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf8Q8VC56 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf8Q8VC56 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf8Q8VC56 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf8Q8VC56 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.98■□□□□ 0.79
Rnf8Q8VC56 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rnf8Q8VC56 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf8Q8VC56 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf8Q8VC56 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf8Q8VC56 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf8Q8VC56 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf8Q8VC56 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.97■□□□□ 0.79
Rnf8Q8VC56 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Rnf8Q8VC56 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.97■□□□□ 0.79
Rnf8Q8VC56 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf8Q8VC56 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rnf8Q8VC56 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf8Q8VC56 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf8Q8VC56 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Gm45444-201ENSMUST00000211394 898 ntBASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf8Q8VC56 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf8Q8VC56 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf8Q8VC56 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf8Q8VC56 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf8Q8VC56 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf8Q8VC56 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf8Q8VC56 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf8Q8VC56 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf8Q8VC56 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf8Q8VC56 Gm43566-201ENSMUST00000196851 808 ntBASIC19.91■□□□□ 0.78
Rnf8Q8VC56 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf8Q8VC56 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms