Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Slf1Q8R3P9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21■□□□□ 0.95
Slf1Q8R3P9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Slf1Q8R3P9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slf1Q8R3P9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Slf1Q8R3P9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slf1Q8R3P9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slf1Q8R3P9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slf1Q8R3P9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slf1Q8R3P9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slf1Q8R3P9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Slf1Q8R3P9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slf1Q8R3P9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slf1Q8R3P9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slf1Q8R3P9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slf1Q8R3P9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slf1Q8R3P9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.95■□□□□ 0.94
Slf1Q8R3P9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slf1Q8R3P9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slf1Q8R3P9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slf1Q8R3P9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.93■□□□□ 0.94
Slf1Q8R3P9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slf1Q8R3P9 Scarna2-201ENSMUST00000157560 414 ntBASIC20.93■□□□□ 0.94
Slf1Q8R3P9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slf1Q8R3P9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slf1Q8R3P9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slf1Q8R3P9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Gm9806-201ENSMUST00000051080 552 ntBASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slf1Q8R3P9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slf1Q8R3P9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms