Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Chmp7Q8R1T1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp7Q8R1T1 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.96■■□□□ 1.91
Chmp7Q8R1T1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Chmp7Q8R1T1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Chmp7Q8R1T1 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.96■■□□□ 1.91
Chmp7Q8R1T1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Chmp7Q8R1T1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Chmp7Q8R1T1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Chmp7Q8R1T1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Chmp7Q8R1T1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Chmp7Q8R1T1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Chmp7Q8R1T1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.94■■□□□ 1.9
Chmp7Q8R1T1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC26.94■■□□□ 1.9
Chmp7Q8R1T1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Chmp7Q8R1T1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC26.94■■□□□ 1.9
Chmp7Q8R1T1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Chmp7Q8R1T1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Chmp7Q8R1T1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Chmp7Q8R1T1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Chmp7Q8R1T1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Chmp7Q8R1T1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
Chmp7Q8R1T1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chmp7Q8R1T1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chmp7Q8R1T1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.9■■□□□ 1.9
Chmp7Q8R1T1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Chmp7Q8R1T1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chmp7Q8R1T1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.89■■□□□ 1.9
Chmp7Q8R1T1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Chmp7Q8R1T1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
Chmp7Q8R1T1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC26.89■■□□□ 1.9
Chmp7Q8R1T1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Chmp7Q8R1T1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Chmp7Q8R1T1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp7Q8R1T1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp7Q8R1T1 Gm43137-201ENSMUST00000198052 594 ntBASIC26.88■■□□□ 1.89
Chmp7Q8R1T1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.88■■□□□ 1.89
Chmp7Q8R1T1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp7Q8R1T1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp7Q8R1T1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chmp7Q8R1T1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chmp7Q8R1T1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chmp7Q8R1T1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
Chmp7Q8R1T1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.87■■□□□ 1.89
Chmp7Q8R1T1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chmp7Q8R1T1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chmp7Q8R1T1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Chmp7Q8R1T1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.86■■□□□ 1.89
Chmp7Q8R1T1 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.86■■□□□ 1.89
Chmp7Q8R1T1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chmp7Q8R1T1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chmp7Q8R1T1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chmp7Q8R1T1 Gm6139-201ENSMUST00000079261 882 ntBASIC26.85■■□□□ 1.89
Chmp7Q8R1T1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Chmp7Q8R1T1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Chmp7Q8R1T1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Chmp7Q8R1T1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Chmp7Q8R1T1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Chmp7Q8R1T1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Chmp7Q8R1T1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Chmp7Q8R1T1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC26.83■■□□□ 1.89
Chmp7Q8R1T1 Gm7143-201ENSMUST00000222811 859 ntBASIC26.83■■□□□ 1.89
Chmp7Q8R1T1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Chmp7Q8R1T1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
Chmp7Q8R1T1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.88
Chmp7Q8R1T1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Chmp7Q8R1T1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Chmp7Q8R1T1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Chmp7Q8R1T1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Chmp7Q8R1T1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Chmp7Q8R1T1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Chmp7Q8R1T1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Chmp7Q8R1T1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Chmp7Q8R1T1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC26.81■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms