Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.61■■□□□ 1.69
Sf3a1Q8K4Z5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sf3a1Q8K4Z5 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.61■■□□□ 1.69
Sf3a1Q8K4Z5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sf3a1Q8K4Z5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sf3a1Q8K4Z5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sf3a1Q8K4Z5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sf3a1Q8K4Z5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sf3a1Q8K4Z5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sf3a1Q8K4Z5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sf3a1Q8K4Z5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Sf3a1Q8K4Z5 Gm10620-201ENSMUST00000098379 1332 ntBASIC25.6■■□□□ 1.69
Sf3a1Q8K4Z5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Sf3a1Q8K4Z5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sf3a1Q8K4Z5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sf3a1Q8K4Z5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sf3a1Q8K4Z5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Sf3a1Q8K4Z5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sf3a1Q8K4Z5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Sf3a1Q8K4Z5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Sf3a1Q8K4Z5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.55■■□□□ 1.68
Sf3a1Q8K4Z5 Gm9959-201ENSMUST00000068277 390 ntBASIC25.55■■□□□ 1.68
Sf3a1Q8K4Z5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sf3a1Q8K4Z5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sf3a1Q8K4Z5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sf3a1Q8K4Z5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.54■■□□□ 1.68
Sf3a1Q8K4Z5 Gm40881-201ENSMUST00000223397 166 ntBASIC25.54■■□□□ 1.68
Sf3a1Q8K4Z5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sf3a1Q8K4Z5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sf3a1Q8K4Z5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Sf3a1Q8K4Z5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Sf3a1Q8K4Z5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.53■■□□□ 1.68
Sf3a1Q8K4Z5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sf3a1Q8K4Z5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.51■■□□□ 1.67
Sf3a1Q8K4Z5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sf3a1Q8K4Z5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sf3a1Q8K4Z5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sf3a1Q8K4Z5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sf3a1Q8K4Z5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Gm45102-201ENSMUST00000207427 857 ntBASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Sf3a1Q8K4Z5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Etf1-202ENSMUST00000180351 108 ntBASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Sf3a1Q8K4Z5 Rps24-207ENSMUST00000224568 714 ntBASIC25.47■■□□□ 1.67
Sf3a1Q8K4Z5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Sf3a1Q8K4Z5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms