Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim68Q8K243 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim68Q8K243 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
Trim68Q8K243 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.57■■□□□ 1.2
Trim68Q8K243 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.57■■□□□ 1.2
Trim68Q8K243 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim68Q8K243 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim68Q8K243 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim68Q8K243 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim68Q8K243 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Trim68Q8K243 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim68Q8K243 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trim68Q8K243 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim68Q8K243 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim68Q8K243 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.56■■□□□ 1.2
Trim68Q8K243 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.56■■□□□ 1.2
Trim68Q8K243 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.56■■□□□ 1.2
Trim68Q8K243 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.56■■□□□ 1.2
Trim68Q8K243 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim68Q8K243 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim68Q8K243 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim68Q8K243 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.55■■□□□ 1.2
Trim68Q8K243 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
Trim68Q8K243 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim68Q8K243 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Trim68Q8K243 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim68Q8K243 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.54■■□□□ 1.2
Trim68Q8K243 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Trim68Q8K243 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim68Q8K243 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim68Q8K243 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.54■■□□□ 1.2
Trim68Q8K243 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim68Q8K243 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim68Q8K243 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.53■■□□□ 1.2
Trim68Q8K243 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim68Q8K243 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim68Q8K243 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Trim68Q8K243 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim68Q8K243 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.52■■□□□ 1.2
Trim68Q8K243 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim68Q8K243 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.5■■□□□ 1.19
Trim68Q8K243 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.5■■□□□ 1.19
Trim68Q8K243 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Trim68Q8K243 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.5■■□□□ 1.19
Trim68Q8K243 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim68Q8K243 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim68Q8K243 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim68Q8K243 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.49■■□□□ 1.19
Trim68Q8K243 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim68Q8K243 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim68Q8K243 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim68Q8K243 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim68Q8K243 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.49■■□□□ 1.19
Trim68Q8K243 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim68Q8K243 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim68Q8K243 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.49■■□□□ 1.19
Trim68Q8K243 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim68Q8K243 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim68Q8K243 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim68Q8K243 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim68Q8K243 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim68Q8K243 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim68Q8K243 Gm8495-201ENSMUST00000188740 694 ntBASIC22.48■■□□□ 1.19
Trim68Q8K243 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim68Q8K243 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Trim68Q8K243 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Trim68Q8K243 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.47■■□□□ 1.19
Trim68Q8K243 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim68Q8K243 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim68Q8K243 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Trim68Q8K243 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim68Q8K243 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim68Q8K243 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trim68Q8K243 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim68Q8K243 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.46■■□□□ 1.19
Trim68Q8K243 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Trim68Q8K243 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim68Q8K243 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim68Q8K243 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim68Q8K243 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim68Q8K243 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim68Q8K243 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms