Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Scamp1Q8K021 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Scamp1Q8K021 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp1Q8K021 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.46■□□□□ 0.87
Scamp1Q8K021 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp1Q8K021 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp1Q8K021 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp1Q8K021 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp1Q8K021 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scamp1Q8K021 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp1Q8K021 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp1Q8K021 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp1Q8K021 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp1Q8K021 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp1Q8K021 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp1Q8K021 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp1Q8K021 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp1Q8K021 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.44■□□□□ 0.86
Scamp1Q8K021 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp1Q8K021 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp1Q8K021 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.44■□□□□ 0.86
Scamp1Q8K021 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp1Q8K021 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.43■□□□□ 0.86
Scamp1Q8K021 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp1Q8K021 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp1Q8K021 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp1Q8K021 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp1Q8K021 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scamp1Q8K021 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scamp1Q8K021 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.4■□□□□ 0.86
Scamp1Q8K021 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Scamp1Q8K021 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.4■□□□□ 0.86
Scamp1Q8K021 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scamp1Q8K021 Gm13241-201ENSMUST00000094493 780 ntBASIC20.4■□□□□ 0.86
Scamp1Q8K021 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scamp1Q8K021 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scamp1Q8K021 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scamp1Q8K021 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scamp1Q8K021 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.39■□□□□ 0.85
Scamp1Q8K021 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.39■□□□□ 0.85
Scamp1Q8K021 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp1Q8K021 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp1Q8K021 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp1Q8K021 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.38■□□□□ 0.85
Scamp1Q8K021 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp1Q8K021 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.38■□□□□ 0.85
Scamp1Q8K021 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp1Q8K021 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scamp1Q8K021 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scamp1Q8K021 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.36■□□□□ 0.85
Scamp1Q8K021 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
Scamp1Q8K021 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Scamp1Q8K021 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Scamp1Q8K021 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Scamp1Q8K021 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Scamp1Q8K021 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.35■□□□□ 0.85
Scamp1Q8K021 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scamp1Q8K021 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scamp1Q8K021 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Scamp1Q8K021 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scamp1Q8K021 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.35■□□□□ 0.85
Scamp1Q8K021 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms