Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfwd3Q8CIK8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.61■□□□□ 0.73
Rfwd3Q8CIK8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfwd3Q8CIK8 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.61■□□□□ 0.73
Rfwd3Q8CIK8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfwd3Q8CIK8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfwd3Q8CIK8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.6■□□□□ 0.73
Rfwd3Q8CIK8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.6■□□□□ 0.73
Rfwd3Q8CIK8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Rfwd3Q8CIK8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rfwd3Q8CIK8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rfwd3Q8CIK8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rfwd3Q8CIK8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.59■□□□□ 0.73
Rfwd3Q8CIK8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.59■□□□□ 0.73
Rfwd3Q8CIK8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.59■□□□□ 0.73
Rfwd3Q8CIK8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rfwd3Q8CIK8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfwd3Q8CIK8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfwd3Q8CIK8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfwd3Q8CIK8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rfwd3Q8CIK8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfwd3Q8CIK8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfwd3Q8CIK8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Gm15820-201ENSMUST00000201566 728 ntBASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfwd3Q8CIK8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfwd3Q8CIK8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rfwd3Q8CIK8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfwd3Q8CIK8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfwd3Q8CIK8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfwd3Q8CIK8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.55■□□□□ 0.72
Rfwd3Q8CIK8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfwd3Q8CIK8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfwd3Q8CIK8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.53■□□□□ 0.72
Rfwd3Q8CIK8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.53■□□□□ 0.72
Rfwd3Q8CIK8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.53■□□□□ 0.72
Rfwd3Q8CIK8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfwd3Q8CIK8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfwd3Q8CIK8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.52■□□□□ 0.72
Rfwd3Q8CIK8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rfwd3Q8CIK8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfwd3Q8CIK8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rfwd3Q8CIK8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.52■□□□□ 0.72
Rfwd3Q8CIK8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfwd3Q8CIK8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfwd3Q8CIK8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rfwd3Q8CIK8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd3Q8CIK8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd3Q8CIK8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms