Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clip4Q8CI96 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clip4Q8CI96 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Clip4Q8CI96 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Clip4Q8CI96 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.93■□□□□ 0.94
Clip4Q8CI96 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clip4Q8CI96 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clip4Q8CI96 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Clip4Q8CI96 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clip4Q8CI96 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Clip4Q8CI96 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clip4Q8CI96 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.92■□□□□ 0.94
Clip4Q8CI96 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clip4Q8CI96 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clip4Q8CI96 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clip4Q8CI96 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clip4Q8CI96 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clip4Q8CI96 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clip4Q8CI96 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clip4Q8CI96 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clip4Q8CI96 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Clip4Q8CI96 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clip4Q8CI96 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clip4Q8CI96 Gm22567-201ENSMUST00000175542 342 ntBASIC20.89■□□□□ 0.93
Clip4Q8CI96 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.89■□□□□ 0.93
Clip4Q8CI96 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.89■□□□□ 0.93
Clip4Q8CI96 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clip4Q8CI96 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clip4Q8CI96 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clip4Q8CI96 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clip4Q8CI96 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip4Q8CI96 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.85■□□□□ 0.93
Clip4Q8CI96 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip4Q8CI96 Gm15820-201ENSMUST00000201566 728 ntBASIC20.85■□□□□ 0.93
Clip4Q8CI96 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip4Q8CI96 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clip4Q8CI96 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip4Q8CI96 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clip4Q8CI96 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.84■□□□□ 0.93
Clip4Q8CI96 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clip4Q8CI96 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip4Q8CI96 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip4Q8CI96 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip4Q8CI96 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clip4Q8CI96 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clip4Q8CI96 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Clip4Q8CI96 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Clip4Q8CI96 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Clip4Q8CI96 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Clip4Q8CI96 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip4Q8CI96 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms