Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh1Q8CGV4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.41■□□□□ 0.86
Rdh1Q8CGV4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh1Q8CGV4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rdh1Q8CGV4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rdh1Q8CGV4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rdh1Q8CGV4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Gm21956-201ENSMUST00000179946 522 ntBASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh1Q8CGV4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh1Q8CGV4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.37■□□□□ 0.85
Rdh1Q8CGV4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.37■□□□□ 0.85
Rdh1Q8CGV4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh1Q8CGV4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Rdh1Q8CGV4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.37■□□□□ 0.85
Rdh1Q8CGV4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rdh1Q8CGV4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh1Q8CGV4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Gm15039-201ENSMUST00000118914 875 ntBASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.36■□□□□ 0.85
Rdh1Q8CGV4 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.35■□□□□ 0.85
Rdh1Q8CGV4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh1Q8CGV4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.35■□□□□ 0.85
Rdh1Q8CGV4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh1Q8CGV4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.35■□□□□ 0.85
Rdh1Q8CGV4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh1Q8CGV4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.34■□□□□ 0.85
Rdh1Q8CGV4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh1Q8CGV4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rdh1Q8CGV4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh1Q8CGV4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh1Q8CGV4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh1Q8CGV4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.33■□□□□ 0.85
Rdh1Q8CGV4 Golgb1-201ENSMUST00000023534 498 ntBASIC20.33■□□□□ 0.85
Rdh1Q8CGV4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh1Q8CGV4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh1Q8CGV4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh1Q8CGV4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh1Q8CGV4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh1Q8CGV4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.3■□□□□ 0.84
Rdh1Q8CGV4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms