Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab43Q8CG50 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rab43Q8CG50 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab43Q8CG50 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab43Q8CG50 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab43Q8CG50 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.42■□□□□ 0.86
Rab43Q8CG50 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
Rab43Q8CG50 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab43Q8CG50 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.42■□□□□ 0.86
Rab43Q8CG50 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab43Q8CG50 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab43Q8CG50 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.4■□□□□ 0.86
Rab43Q8CG50 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rab43Q8CG50 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rab43Q8CG50 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Rab43Q8CG50 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab43Q8CG50 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
Rab43Q8CG50 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab43Q8CG50 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab43Q8CG50 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.39■□□□□ 0.85
Rab43Q8CG50 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rab43Q8CG50 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Rab43Q8CG50 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab43Q8CG50 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab43Q8CG50 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rab43Q8CG50 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
Rab43Q8CG50 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab43Q8CG50 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab43Q8CG50 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.38■□□□□ 0.85
Rab43Q8CG50 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rab43Q8CG50 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rab43Q8CG50 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rab43Q8CG50 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rab43Q8CG50 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab43Q8CG50 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rab43Q8CG50 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.35■□□□□ 0.85
Rab43Q8CG50 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab43Q8CG50 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.34■□□□□ 0.85
Rab43Q8CG50 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab43Q8CG50 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rab43Q8CG50 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rab43Q8CG50 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rab43Q8CG50 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.33■□□□□ 0.84
Rab43Q8CG50 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Rab43Q8CG50 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rab43Q8CG50 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.33■□□□□ 0.84
Rab43Q8CG50 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rab43Q8CG50 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
Rab43Q8CG50 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rab43Q8CG50 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms