Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc5Q8CG46 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Smc5Q8CG46 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smc5Q8CG46 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc5Q8CG46 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc5Q8CG46 Gm43592-201ENSMUST00000196922 1165 ntBASIC26■■□□□ 1.75
Smc5Q8CG46 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc5Q8CG46 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smc5Q8CG46 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc5Q8CG46 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smc5Q8CG46 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smc5Q8CG46 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smc5Q8CG46 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.99■■□□□ 1.75
Smc5Q8CG46 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.99■■□□□ 1.75
Smc5Q8CG46 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Smc5Q8CG46 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Smc5Q8CG46 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Smc5Q8CG46 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Smc5Q8CG46 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Smc5Q8CG46 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc5Q8CG46 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc5Q8CG46 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc5Q8CG46 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Smc5Q8CG46 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Smc5Q8CG46 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Smc5Q8CG46 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Smc5Q8CG46 Gm7332-201ENSMUST00000118351 454 ntBASIC25.96■■□□□ 1.75
Smc5Q8CG46 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.96■■□□□ 1.75
Smc5Q8CG46 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
Smc5Q8CG46 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Smc5Q8CG46 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smc5Q8CG46 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smc5Q8CG46 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smc5Q8CG46 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Smc5Q8CG46 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smc5Q8CG46 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smc5Q8CG46 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Smc5Q8CG46 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smc5Q8CG46 Gm34220-201ENSMUST00000223001 2709 ntBASIC25.94■■□□□ 1.74
Smc5Q8CG46 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc5Q8CG46 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc5Q8CG46 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc5Q8CG46 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc5Q8CG46 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc5Q8CG46 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc5Q8CG46 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc5Q8CG46 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc5Q8CG46 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC25.92■■□□□ 1.74
Smc5Q8CG46 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc5Q8CG46 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Smc5Q8CG46 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smc5Q8CG46 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Smc5Q8CG46 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Smc5Q8CG46 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smc5Q8CG46 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Smc5Q8CG46 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smc5Q8CG46 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smc5Q8CG46 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Smc5Q8CG46 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
Smc5Q8CG46 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Smc5Q8CG46 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Smc5Q8CG46 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Smc5Q8CG46 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.9■■□□□ 1.74
Smc5Q8CG46 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Smc5Q8CG46 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Smc5Q8CG46 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Smc5Q8CG46 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Smc5Q8CG46 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Smc5Q8CG46 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Smc5Q8CG46 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Smc5Q8CG46 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Smc5Q8CG46 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smc5Q8CG46 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smc5Q8CG46 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smc5Q8CG46 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smc5Q8CG46 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Smc5Q8CG46 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smc5Q8CG46 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.86■■□□□ 1.73
Smc5Q8CG46 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms