Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.26■■□□□ 1.79
Trim52Q8CDV4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim52Q8CDV4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim52Q8CDV4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trim52Q8CDV4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim52Q8CDV4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim52Q8CDV4 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.25■■□□□ 1.79
Trim52Q8CDV4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC26.25■■□□□ 1.79
Trim52Q8CDV4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim52Q8CDV4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
Trim52Q8CDV4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trim52Q8CDV4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Trim52Q8CDV4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim52Q8CDV4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.24■■□□□ 1.79
Trim52Q8CDV4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Trim52Q8CDV4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim52Q8CDV4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Trim52Q8CDV4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.23■■□□□ 1.79
Trim52Q8CDV4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Trim52Q8CDV4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim52Q8CDV4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC26.21■■□□□ 1.79
Trim52Q8CDV4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.21■■□□□ 1.79
Trim52Q8CDV4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim52Q8CDV4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Trim52Q8CDV4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Trim52Q8CDV4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim52Q8CDV4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
Trim52Q8CDV4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trim52Q8CDV4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim52Q8CDV4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim52Q8CDV4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim52Q8CDV4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Trim52Q8CDV4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim52Q8CDV4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
Trim52Q8CDV4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim52Q8CDV4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim52Q8CDV4 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.18■■□□□ 1.78
Trim52Q8CDV4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim52Q8CDV4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim52Q8CDV4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim52Q8CDV4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Trim52Q8CDV4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim52Q8CDV4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Trim52Q8CDV4 Gm7143-201ENSMUST00000222811 859 ntBASIC26.17■■□□□ 1.78
Trim52Q8CDV4 Serp2-204ENSMUST00000228055 705 ntBASIC26.17■■□□□ 1.78
Trim52Q8CDV4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC26.17■■□□□ 1.78
Trim52Q8CDV4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
Trim52Q8CDV4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim52Q8CDV4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim52Q8CDV4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim52Q8CDV4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.16■■□□□ 1.78
Trim52Q8CDV4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim52Q8CDV4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim52Q8CDV4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trim52Q8CDV4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trim52Q8CDV4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Trim52Q8CDV4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trim52Q8CDV4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Trim52Q8CDV4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trim52Q8CDV4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Trim52Q8CDV4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim52Q8CDV4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim52Q8CDV4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.13■■□□□ 1.77
Trim52Q8CDV4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim52Q8CDV4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim52Q8CDV4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim52Q8CDV4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim52Q8CDV4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC26.13■■□□□ 1.77
Trim52Q8CDV4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trim52Q8CDV4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim52Q8CDV4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Trim52Q8CDV4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trim52Q8CDV4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC26.11■■□□□ 1.77
Trim52Q8CDV4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim52Q8CDV4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trim52Q8CDV4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Trim52Q8CDV4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim52Q8CDV4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim52Q8CDV4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Trim52Q8CDV4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC26.09■■□□□ 1.77
Trim52Q8CDV4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26.09■■□□□ 1.77
Trim52Q8CDV4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Trim52Q8CDV4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim52Q8CDV4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms