Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rtp1Q8C8C1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.22■■□□□ 1.47
Rtp1Q8C8C1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rtp1Q8C8C1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rtp1Q8C8C1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Rtp1Q8C8C1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rtp1Q8C8C1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rtp1Q8C8C1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rtp1Q8C8C1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.21■■□□□ 1.47
Rtp1Q8C8C1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rtp1Q8C8C1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Rtp1Q8C8C1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtp1Q8C8C1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtp1Q8C8C1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtp1Q8C8C1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtp1Q8C8C1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.2■■□□□ 1.46
Rtp1Q8C8C1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtp1Q8C8C1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtp1Q8C8C1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rtp1Q8C8C1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtp1Q8C8C1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtp1Q8C8C1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.19■■□□□ 1.46
Rtp1Q8C8C1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtp1Q8C8C1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtp1Q8C8C1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtp1Q8C8C1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.18■■□□□ 1.46
Rtp1Q8C8C1 Gm26571-201ENSMUST00000181399 666 ntBASIC24.18■■□□□ 1.46
Rtp1Q8C8C1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.18■■□□□ 1.46
Rtp1Q8C8C1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC24.18■■□□□ 1.46
Rtp1Q8C8C1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rtp1Q8C8C1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Gm27011-201ENSMUST00000182352 972 ntBASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Gm27405-201ENSMUST00000184201 112 ntBASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Gm42569-201ENSMUST00000200539 472 ntBASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtp1Q8C8C1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtp1Q8C8C1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Rtp1Q8C8C1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtp1Q8C8C1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.15■■□□□ 1.46
Rtp1Q8C8C1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.15■■□□□ 1.46
Rtp1Q8C8C1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Rtp1Q8C8C1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtp1Q8C8C1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Rtp1Q8C8C1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.14■■□□□ 1.45
Rtp1Q8C8C1 Gm43173-201ENSMUST00000202246 593 ntBASIC24.14■■□□□ 1.45
Rtp1Q8C8C1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.14■■□□□ 1.45
Rtp1Q8C8C1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rtp1Q8C8C1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtp1Q8C8C1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rtp1Q8C8C1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtp1Q8C8C1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtp1Q8C8C1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rtp1Q8C8C1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtp1Q8C8C1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtp1Q8C8C1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Rtp1Q8C8C1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Rtp1Q8C8C1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Rtp1Q8C8C1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtp1Q8C8C1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtp1Q8C8C1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rtp1Q8C8C1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Rtp1Q8C8C1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rtp1Q8C8C1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Rtp1Q8C8C1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rtp1Q8C8C1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Rtp1Q8C8C1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rtp1Q8C8C1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rtp1Q8C8C1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 151.8 ms