Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd9Q8BYH8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.83■□□□□ 0.28
Chd9Q8BYH8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd9Q8BYH8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd9Q8BYH8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd9Q8BYH8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd9Q8BYH8 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.79■□□□□ 0.28
Chd9Q8BYH8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chd9Q8BYH8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Gm43173-201ENSMUST00000202246 593 ntBASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd9Q8BYH8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd9Q8BYH8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd9Q8BYH8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Chd9Q8BYH8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd9Q8BYH8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd9Q8BYH8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chd9Q8BYH8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chd9Q8BYH8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd9Q8BYH8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Chd9Q8BYH8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd9Q8BYH8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd9Q8BYH8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 AV356131-201ENSMUST00000206201 750 ntBASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Gm7143-201ENSMUST00000222811 859 ntBASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chd9Q8BYH8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Gm12933-201ENSMUST00000120203 872 ntBASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd9Q8BYH8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Gm10033-202ENSMUST00000211874 928 ntBASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd9Q8BYH8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd9Q8BYH8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Chd9Q8BYH8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.72■□□□□ 0.27
Chd9Q8BYH8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd9Q8BYH8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd9Q8BYH8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms