Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp43Q8BUM9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp43Q8BUM9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Usp43Q8BUM9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp43Q8BUM9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.25■□□□□ 0.99
Usp43Q8BUM9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp43Q8BUM9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp43Q8BUM9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp43Q8BUM9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp43Q8BUM9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp43Q8BUM9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Usp43Q8BUM9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Gm10232-201ENSMUST00000089221 720 ntBASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp43Q8BUM9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp43Q8BUM9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp43Q8BUM9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp43Q8BUM9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp43Q8BUM9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp43Q8BUM9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp43Q8BUM9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp43Q8BUM9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp43Q8BUM9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp43Q8BUM9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.2■□□□□ 0.98
Usp43Q8BUM9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Usp43Q8BUM9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.2■□□□□ 0.98
Usp43Q8BUM9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.2■□□□□ 0.98
Usp43Q8BUM9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp43Q8BUM9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp43Q8BUM9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.2■□□□□ 0.98
Usp43Q8BUM9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp43Q8BUM9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp43Q8BUM9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.19■□□□□ 0.98
Usp43Q8BUM9 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.19■□□□□ 0.98
Usp43Q8BUM9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp43Q8BUM9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp43Q8BUM9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp43Q8BUM9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.17■□□□□ 0.98
Usp43Q8BUM9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp43Q8BUM9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp43Q8BUM9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.16■□□□□ 0.98
Usp43Q8BUM9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp43Q8BUM9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp43Q8BUM9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
Usp43Q8BUM9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp43Q8BUM9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Usp43Q8BUM9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp43Q8BUM9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp43Q8BUM9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp43Q8BUM9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp43Q8BUM9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp43Q8BUM9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp43Q8BUM9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp43Q8BUM9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp43Q8BUM9 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.13■□□□□ 0.97
Usp43Q8BUM9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms