Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Srrm4Q8BKA3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.12■□□□□ 0.49
Srrm4Q8BKA3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.12■□□□□ 0.49
Srrm4Q8BKA3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.12■□□□□ 0.49
Srrm4Q8BKA3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm4Q8BKA3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.11■□□□□ 0.49
Srrm4Q8BKA3 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.11■□□□□ 0.49
Srrm4Q8BKA3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm4Q8BKA3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Srrm4Q8BKA3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srrm4Q8BKA3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm4Q8BKA3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm4Q8BKA3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm4Q8BKA3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm4Q8BKA3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm4Q8BKA3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm4Q8BKA3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm4Q8BKA3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Srrm4Q8BKA3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm4Q8BKA3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm4Q8BKA3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm4Q8BKA3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm4Q8BKA3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm4Q8BKA3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm4Q8BKA3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm4Q8BKA3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm4Q8BKA3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm4Q8BKA3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm4Q8BKA3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm4Q8BKA3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm4Q8BKA3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm4Q8BKA3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm4Q8BKA3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.05■□□□□ 0.48
Srrm4Q8BKA3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Srrm4Q8BKA3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Gm9959-201ENSMUST00000068277 390 ntBASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
Srrm4Q8BKA3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm4Q8BKA3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm4Q8BKA3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm4Q8BKA3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm4Q8BKA3 Gm45102-201ENSMUST00000207427 857 ntBASIC18.02■□□□□ 0.48
Srrm4Q8BKA3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.02■□□□□ 0.48
Srrm4Q8BKA3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.02■□□□□ 0.48
Srrm4Q8BKA3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Srrm4Q8BKA3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Srrm4Q8BKA3 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.02■□□□□ 0.47
Srrm4Q8BKA3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms