Protein–RNA interactions for Protein: Q80XD1

Chn2, Beta-chimaerin, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chn2Q80XD1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chn2Q80XD1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.06■■□□□ 1.12
Chn2Q80XD1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chn2Q80XD1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chn2Q80XD1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chn2Q80XD1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chn2Q80XD1 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.06■■□□□ 1.12
Chn2Q80XD1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chn2Q80XD1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Chn2Q80XD1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chn2Q80XD1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chn2Q80XD1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.05■■□□□ 1.12
Chn2Q80XD1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Chn2Q80XD1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Chn2Q80XD1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Chn2Q80XD1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
Chn2Q80XD1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.03■■□□□ 1.12
Chn2Q80XD1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chn2Q80XD1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.02■■□□□ 1.12
Chn2Q80XD1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Chn2Q80XD1 Gm22238-201ENSMUST00000175222 88 ntBASIC22.02■■□□□ 1.12
Chn2Q80XD1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chn2Q80XD1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chn2Q80XD1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chn2Q80XD1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chn2Q80XD1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Chn2Q80XD1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chn2Q80XD1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chn2Q80XD1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.01■■□□□ 1.11
Chn2Q80XD1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chn2Q80XD1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chn2Q80XD1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chn2Q80XD1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chn2Q80XD1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.01■■□□□ 1.11
Chn2Q80XD1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.01■■□□□ 1.11
Chn2Q80XD1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chn2Q80XD1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Chn2Q80XD1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chn2Q80XD1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22■■□□□ 1.11
Chn2Q80XD1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22■■□□□ 1.11
Chn2Q80XD1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
Chn2Q80XD1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chn2Q80XD1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Chn2Q80XD1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Chn2Q80XD1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Chn2Q80XD1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.99■■□□□ 1.11
Chn2Q80XD1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chn2Q80XD1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chn2Q80XD1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.98■■□□□ 1.11
Chn2Q80XD1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chn2Q80XD1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Chn2Q80XD1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Chn2Q80XD1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Chn2Q80XD1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chn2Q80XD1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.97■■□□□ 1.11
Chn2Q80XD1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chn2Q80XD1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chn2Q80XD1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chn2Q80XD1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chn2Q80XD1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.95■■□□□ 1.1
Chn2Q80XD1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chn2Q80XD1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.95■■□□□ 1.1
Chn2Q80XD1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chn2Q80XD1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Chn2Q80XD1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chn2Q80XD1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Chn2Q80XD1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chn2Q80XD1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chn2Q80XD1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chn2Q80XD1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chn2Q80XD1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Chn2Q80XD1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chn2Q80XD1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms