Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Vrk1Q80X41 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vrk1Q80X41 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vrk1Q80X41 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.95■□□□□ 0.78
Vrk1Q80X41 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Vrk1Q80X41 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.94■□□□□ 0.78
Vrk1Q80X41 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vrk1Q80X41 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vrk1Q80X41 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Vrk1Q80X41 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vrk1Q80X41 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Vrk1Q80X41 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vrk1Q80X41 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vrk1Q80X41 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Vrk1Q80X41 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vrk1Q80X41 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vrk1Q80X41 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vrk1Q80X41 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vrk1Q80X41 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.91■□□□□ 0.78
Vrk1Q80X41 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.91■□□□□ 0.78
Vrk1Q80X41 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vrk1Q80X41 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Vrk1Q80X41 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vrk1Q80X41 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vrk1Q80X41 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.88■□□□□ 0.77
Vrk1Q80X41 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.88■□□□□ 0.77
Vrk1Q80X41 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vrk1Q80X41 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vrk1Q80X41 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.88■□□□□ 0.77
Vrk1Q80X41 Gm9870-201ENSMUST00000063874 645 ntBASIC19.88■□□□□ 0.77
Vrk1Q80X41 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vrk1Q80X41 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vrk1Q80X41 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.86■□□□□ 0.77
Vrk1Q80X41 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Vrk1Q80X41 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vrk1Q80X41 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vrk1Q80X41 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vrk1Q80X41 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.86■□□□□ 0.77
Vrk1Q80X41 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Vrk1Q80X41 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vrk1Q80X41 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.85■□□□□ 0.77
Vrk1Q80X41 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vrk1Q80X41 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.85■□□□□ 0.77
Vrk1Q80X41 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vrk1Q80X41 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vrk1Q80X41 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Vrk1Q80X41 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vrk1Q80X41 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vrk1Q80X41 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Vrk1Q80X41 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vrk1Q80X41 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms